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  • 标题:The logic of metabolism
  • 本地全文:下载
  • 作者:Antoine Danchin ; Antoine Danchin ; Agnieszka Sekowska
  • 期刊名称:Perspectives in Science
  • 印刷版ISSN:2213-0209
  • 电子版ISSN:2213-0209
  • 出版年度:2015
  • 卷号:6
  • 页码:15-26
  • DOI:10.1016/j.pisc.2015.05.003
  • 语种:English
  • 出版社:Elsevier
  • 摘要:Summary Metabolism is often perceived as a fairly haphazard intertwined collection of chemical compounds that needs to be memorised by heart. The apparent absence of logic in its organisation dissuades most investigators to enter its arcanes. Yet, metabolism, that results from highly selective constraints is logically organised. The atoms of life must build up stable covalent bonds. Symmetry breaking is the rule. Proteinogenic amino acids are of the l-enantiomer type, and this will imply that carbohydrates are of the d-type. Water is ubiquitous because it favours entropy-driven shaping of macromolecules. Then, being the bathing medium of life, hydrolysis is the driving force in orientating pathways. Phosphates, in water, are metastable towards hydrolysis, and this makes them the ultimate energy quantum and currency. Making a variety of reactive molecules in the same retort implies either compartmentalisation or a protection/deprotection procedure, as in the laboratory of all chemists.
  • 关键词:Metabolism;Synthetic biology;Paralogous metabolism;Compound asymmetry;Chemical reaction;Cell dynamics
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