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  • 标题:Single-cell transcriptome and epigenomic reprogramming of cardiomyocyte-derived cardiac progenitor cells
  • 本地全文:下载
  • 作者:Xin Chen ; Tushar Chakravarty ; Yiqiang Zhang
  • 期刊名称:Scientific Data
  • 电子版ISSN:2052-4463
  • 出版年度:2016
  • 卷号:3
  • DOI:10.1038/sdata.2016.79
  • 语种:English
  • 出版社:Nature Publishing Group
  • 摘要:The molecular basis underlying the dedifferentiation of mammalian adult cardiomyocytes (ACMs) into myocyte-derived cardiac progenitor cells (mCPCs) during cardiac tissue regeneration is poorly understood. We present data integrating single-cell transcriptome and whole-genome DNA methylome analyses of mouse mCPCs to understand the epigenomic reprogramming governing their intrinsic cellular plasticity. Compared to parental cardiomyocytes, mCPCs display epigenomic reprogramming with many differentially-methylated regions, both hypermethylated and hypomethylated, across the entire genome. Correlating well with the methylome, our single-cell transcriptomic data show that the genes encoding cardiac structure and function proteins are remarkably down-regulated in mCPCs, while those for cell cycle, proliferation, and stemness are significantly up-regulated. In addition, implanting mCPCs into infarcted mouse myocardium improves cardiac function with augmented left ventricular ejection fraction. This dataset suggests that the cellular plasticity of mammalian cardiomyocytes is the result of a well-orchestrated epigenomic reprogramming and a subsequent global transcriptomic alteration. Understanding cardiomyocyte epigenomic reprogramming may enable the design of future clinical therapies that induce cardiac regeneration, and prevent heart failure.
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