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  • 标题:Critical Assessment of Parameter Estimation Methods in Models of Biological Oscillators ⁎
  • 本地全文:下载
  • 作者:Jake Alan Pitt ; Lucian Gomoescu ; Constantinos C. Pantelides
  • 期刊名称:IFAC PapersOnLine
  • 印刷版ISSN:2405-8963
  • 出版年度:2018
  • 卷号:51
  • 期号:19
  • 页码:72-75
  • DOI:10.1016/j.ifacol.2018.09.040
  • 语种:English
  • 出版社:Elsevier
  • 摘要:AbstractMany biological systems exhibit oscillations in relation to key physiological or cellular functions, such as circadian rhythms, mitosis and DNA synthesis. Mathematical modelling provides a powerful approach to analysing these biosystems. Applying parameter estimation methods to calibrate these models can prove a very challenging task in practice, due to the presence of local solutions, lack of identifiability, and risk of overfitting. This paper presents a comparison of three state-of-the-art methods: frequentist, Bayesian and set-membership estimation. We use the Fitzhugh-Nagumo model with synthetic data as a case study. The computational performance and robustness of these methods is discussed, with a particular focus on their predictive capability using cross-validation.
  • 关键词:Keywordsbiological oscillatorsmodel calibrationregularisationoverfittingidentifiabilityfrequentist estimationBayesian estimationset-membership estimation
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