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  • 标题:Genome-wide siRNA screen of genes regulating the LPS-induced TNF- response in human macrophages
  • 本地全文:下载
  • 作者:Jing Sun ; Samuel Katz ; Bhaskar Dutta
  • 期刊名称:Scientific Data
  • 电子版ISSN:2052-4463
  • 出版年度:2017
  • 卷号:4
  • DOI:10.1038/sdata.2017.7
  • 语种:English
  • 出版社:Nature Publishing Group
  • 摘要:The mammalian innate immune system senses many bacterial stimuli through the toll-like receptor (TLR) family. Activation of the TLR4 receptor by bacterial lipopolysaccharide (LPS) is the most widely studied TLR pathway due to its central role in host responses to gram-negative bacterial infection and its contribution to endotoxemia and sepsis. Here we describe a genome-wide siRNA screen to identify genes regulating the human macrophage TNF-伪 response to LPS. We include a secondary validation screen conducted with six independent siRNAs per gene to facilitate removal of off-target screen hits. We also provide microarray data from the same LPS-treated macrophage cells to facilitate downstream data analysis. Tertiary screening with multiple TLR ligands and a microbial extract demonstrate that novel screen hits have broad effects on the innate inflammatory response to microbial stimuli. These data provide a resource for analyzing gene function in the predominant pathway driving inflammatory cytokine expression in human macrophages.
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