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  • 标题:Multi-Biomarker Prediction Models for Multiple Infection Episodes Following Blunt Trauma
  • 本地全文:下载
  • 作者:Amy Tsurumi ; Patrick J. Flaherty ; Yok-Ai Que
  • 期刊名称:iScience
  • 印刷版ISSN:2589-0042
  • 出版年度:2020
  • 卷号:23
  • 期号:11
  • 页码:1-29
  • DOI:10.1016/j.isci.2020.101659
  • 语种:English
  • 出版社:Elsevier
  • 摘要:SummarySevere trauma predisposes patients tomultipleindependentinfectionepisodes (MIIEs), leading to augmented morbidity and mortality. We developed a method to identify increased MIIE risk before clinical signs appear, which is fundamentally different from existing approaches entailing infections' detection after their establishment. Applying machine learning algorithms to genome-wide transcriptome data from 128 adult blunt trauma patients' (42 MIIE cases and 85 non-cases) leukocytes collected ≤48 hr of injury and ≥3 days before any infection, we constructed a 15-transcript and a 26-transcript multi-biomarker panel model with the least absolute shrinkage and selection operator (LASSO) and Elastic Net, respectively, which accurately predicted MIIE (Area Under Receiver Operating Characteristics Curve [AUROC] [95% confidence intervals, CI]: 0.90 [0.84–0.96] and 0.92 [0.86–0.96]) and significantly outperformed clinical models. Gene Ontology and network analyses found various pathways to be relevant. External validation found our model to be generalizable. Our unique precision medicine approach can be applied to a wide range of patient populations and outcomes.Graphical AbstractDisplay OmittedHighlights•We describe a method for predicting multiple independent infection episodes (MIIEs).•We applied machine learning algorithms to transcriptome data to develop models•The biomarker prediction models significantly outperformed clinical models•External validation in another trauma cohort found evidence of generalizabilityArtificial Intelligence; Trauma; Virology
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