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  • 标题:Evidence of new intragenic HBB haplotypes model for the prediction of beta-thalassemia in the Malaysian population
  • 本地全文:下载
  • 作者:Nur-Aisyah Aziz ; Wan-Rohani Wan Taib ; Nur-Khairunnisa Kharolazaman
  • 期刊名称:Scientific Reports
  • 电子版ISSN:2045-2322
  • 出版年度:2021
  • 卷号:11
  • DOI:10.1038/s41598-021-96018-y
  • 语种:English
  • 出版社:Springer Nature
  • 摘要:This study sought to determine the potential role of HBB haplotypes to predict beta-thalassemia in the Malaysian population. A total of 543 archived samples were selected for this study. Five tagging SNPs in the beta-globin gene ( HBB; NG_000007.3) were analyzed for SNP-based and haplotype association using SHEsis online software. Single-SNP-based association analysis showed three SNPs have a statistically significant association with beta-thalassemia. When Bonferroni correction was applied, four SNPs were found statistically significant with beta-thalassemia; IVS2-74T>G ( p adj  = 0.047), IVS2-16G>C ( p adj  = 0.017), IVS2-666C>T ( p adj  = 0.017) and 3’UTR + 314G>A ( p adj  = 0.002). However, 3'UTR + 233G>C did not yield a significant association with p adj value = 0.076. Further investigation using combined five SNPs for haplotype association analysis revealed three susceptible haplotypes with significant p values of which, haplotypes 1-2-2-1-1 ( p  = 6.49 × 10 −7, OR = 10.371 [3.345–32.148
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