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  • 标题:An Adaptive Genetic Algorithm with Recursive Feature Elimination Approach for Predicting Malaria Vector Gene Expression Data Classification using Support Vector Machine Kernels
  • 本地全文:下载
  • 作者:Micheal Olaolu AROWOLO ; Marion Olubunmi ADEBIYI ; Chiebuka Timothy NNODIM
  • 期刊名称:Walailak Journal of Science and Technology (WJST)
  • 印刷版ISSN:2228-835X
  • 出版年度:2021
  • 卷号:18
  • 期号:17
  • 页码:1-11
  • DOI:10.48048/wjst.2021.9849
  • 语种:English
  • 出版社:Institute of Research and Development, Walailak University.
  • 摘要:As mosquito parasites breed across many parts of the sub-Saharan Africa part of the world, infected cells embrace an unpredictable and erratic life period. Millions of individual parasites have gene expressions. Ribonucleic acid sequencing (RNA-seq) is a popular transcriptional technique that has improved the detection of major genetic probes. The RNA-seq analysis generally requires computational improvements of machine learning techniques since it computes interpretations of gene expressions. For this study, an adaptive genetic algorithm (A-GA) with recursive feature elimination (RFE) (A-GA-RFE) feature selection algorithms was utilized to detect important information from a high-dimensional gene expression malaria vector RNA-seq dataset. Support Vector Machine (SVM) kernels were used as the classification algorithms to evaluate its predictive performances. The feasibility of this study was confirmed by using an RNA-seq dataset from the mosquito Anopheles gambiae. The technique results in related performance had 98.3 and 96.7 % accuracy rates, respectively.HIGHLIGHTSDimensionality reduction method based of feature selectionClassification using Support vector machineClassification of malaria vector dataset using an adaptive GA-RFE-SVMGRAPHICAL.
  • 关键词:RNA-seq; Adaptive genetic algorithm; Recursive feature elimination; Malaria vector; Support Vector Machine kernels
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