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  • 标题:Particle Methods for Stochastic Differential Equation Mixed Effects Models
  • 本地全文:下载
  • 作者:Imke Botha ; Robert Kohn ; Christopher Drovandi
  • 期刊名称:Bayesian Analysis
  • 印刷版ISSN:1931-6690
  • 电子版ISSN:1936-0975
  • 出版年度:2021
  • 卷号:16
  • 期号:2
  • 页码:575-609
  • DOI:10.1214/20-BA1216
  • 语种:English
  • 出版社:International Society for Bayesian Analysis
  • 摘要:Parameter inference for stochastic differential equation mixed effects models (SDEMEMs) is challenging. Analytical solutions for these models are rarely available, which means that the likelihood is also intractable. In this case, exact inference (up to the discretisation of the stochastic differential equation) is possible using particle MCMC methods. Although the exact posterior is targeted by these methods, a naive implementation for SDEMEMs can be highly inefficient. Our article develops three extensions to the naive approach which exploit specific aspects of SDEMEMs and other advances such as correlated pseudo-marginal methods. We compare these methods on simulated data and data from a tumour xenography study on mice.
  • 关键词:Bayesian inference; hierarchical models; MCMC; particle Gibbs; pseudo-marginal; random effects
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