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  • 标题:A large, curated, open-source stroke neuroimaging dataset to improve lesion segmentation algorithms
  • 本地全文:下载
  • 作者:Sook-Lei Liew ; Bethany P.Lo ; MirandaR.Donnelly
  • 期刊名称:Scientific Data
  • 电子版ISSN:2052-4463
  • 出版年度:2022
  • 卷号:9
  • 期号:1
  • 页码:1-12
  • DOI:10.1038/s41597-022-01401-7
  • 语种:English
  • 出版社:Nature Publishing Group
  • 摘要:Accurate lesion segmentation is critical in stroke rehabilitation research for the quantifcation of lesion burden and accurate image processing. Current automated lesion segmentation methods for T1-weighted (T1w) MRIs, commonly used in stroke research, lack accuracy and reliability. Manual segmentation remains the gold standard, but it is time-consuming, subjective, and requires neuroanatomical expertise . We previously released an open-source dataset of stroke T1w MRIs and manually-segmented lesion masks (ATLAS v1 .2, N = 304) to encourage the development of better algorithms . However, many methods developed with ATLAS v1 .2 report low accuracy, are not publicly accessible or are improperly validated, limiting their utility to the feld . Here we present ATLAS v2 .0 (N = 1271), a larger dataset of T1w MRIs and manually segmented lesion masks that includes training (n = 655), test (hidden masks, n = 300), and generalizability (hidden MRIs and masks, n = 316) datasets . algorithm development using this larger sample should lead to more robust solutions; the hidden datasets allow for unbiased performance evaluation via segmentation challenges. We anticipate that ATLAS v2 .0 will lead to improved algorithms, facilitating large-scale stroke research.
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