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  • 标题:Short-read and long-read full-length transcriptome of mouse neural stem cells across neurodevelopmental stages
  • 本地全文:下载
  • 作者:Chaoqiong Ding ; XiangYan ; Mengying Xu
  • 期刊名称:Scientific Data
  • 电子版ISSN:2052-4463
  • 出版年度:2022
  • 卷号:9
  • 期号:1
  • 页码:1-10
  • DOI:10.1038/s41597-022-01165-0
  • 语种:English
  • 出版社:Nature Publishing Group
  • 摘要:During brain development, neural stem cells (NSCs) undergo multiple fate-switches to generate various neuronal subtypes and glial cells, exhibiting distinct transcriptomic profles at diferent stages . However, full-length transcriptomic datasets of NSCs across diferent neurodevelopmental stages under similar experimental settings are lacking, which is essential for uncovering stage-specifc transcriptional and post-transcriptional mechanisms underlying the fate commitment of NSCs . Here, we report the full-length transcriptome of mouse NSCs at fve diferent stages during embryonic and postnatal development . We used fuorescent-activated cell sorting (FACS) to isolate CD133+ Blbp+ NSCs from C57BL/6 transgenic mice that express enhanced green fuorescent protein (EGFP) under the control of a Blbp promoter. By integrating short- and long-read full-length RNA-seq, we created a transcriptomic dataset of gene and isoform expression profles in NSCs at embryonic days 15 .5, 17 .5, and postnatal days 1 .5, 8, and 60. This dataset provides a detailed characterization of full- length transcripts in NSCs at distinct developmental stages, which could be used as a resource for the neuroscience community to study NSC fate determination, neural development, and disease .
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