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  • 标题:Size-dependent forced PEG partitioning into channels: VDAC, OmpC, and α-hemolysin
  • 本地全文:下载
  • 作者:M. Alphan Aksoyoglu ; Rudolf Podgornik ; Sergey M. Bezrukov
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2016
  • 卷号:113
  • 期号:32
  • 页码:9003-9008
  • DOI:10.1073/pnas.1602716113
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:Nonideal polymer mixtures of PEGs of different molecular weights partition differently into nanosize protein channels. Here, we assess the validity of the recently proposed theoretical approach of forced partitioning for three structurally different β-barrel channels: voltage-dependent anion channel from outer mitochondrial membrane VDAC, bacterial porin OmpC (outer membrane protein C), and bacterial channel-forming toxin α-hemolysin. Our interpretation is based on the idea that relatively less-penetrating polymers push the more easily penetrating ones into nanosize channels in excess of their bath concentration. Comparison of the theory with experiments is excellent for VDAC. Polymer partitioning data for the other two channels are consistent with theory if additional assumptions regarding the energy penalty of pore penetration are included. The obtained results demonstrate that the general concept of “polymers pushing polymers” is helpful in understanding and quantification of concrete examples of size-dependent forced partitioning of polymers into protein nanopores.
  • 关键词:β-barrel pores ; nanopore-based sensing ; polymer confinement ; polymer transport ; macromolecular crowding
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