Disease, CCR5-[DELTA]32 and the European spread of agriculture? A hypothesis.
Holtby, Ian ; Scarre, Chris ; Bentley, R. Alexander 等
From its origins in the Starcevo-Koros culture of the Hungarian
Plain around 5700 BC the Neolithic archaeological assemblage of the
Linearbandkeramik (LBK) spread within two centuries to reach Alsace and
the middle Rhine by 5500 BC, though the rapidity of the spread makes it
difficult to measure using available radiocarbon evidence (Dolukhanov et
al. 2005). In this same time period, during the Terminal Mesolithic, c.
5800 to 5500 BC, there is evidence for forager-herder-horticulturists in
Central and Western Europe prior to the appearance of the LBK
(Gronenborn 1999, 2009). The Cardial Neolithic complex spread round the
shores of the northern Mediterranean from southern Italy to Portugal in
the period 5700-5400 BC.
Unfavourable climate change may have facilitated the rapid LBK
spread, but seems insufficient to explain the magnitude and speed of
this transition (Gronenborn 2009). Population density of Mesolithic
groups would have been crucial, and the earliest LBK settlements were in
areas of deciduous forests and loess soils considered scarcely visited
by Mesolithic foragers, as evidenced by the paucity of Terminal
Mesolithic sites in Central Europe (Luning et al. 1989). By contrast,
areas where LBK did not spread readily tend to correspond with
demonstrable Mesolithic occupation, including north-west France, the
North European Plain and southern Scandinavia. The speed of LBK spread
thus appears correlated with low density Late Mesolithic population. Iri
the Mediterranean, the Cardial similarly bypassed areas of Mesolithic
settlement and often occupied areas with little Mesolithic habitation.
A hypothesis for low Terminal Mesolithic populations is the
introduction of new diseases such as smallpox, measles, brucellosis and
influenza into Europe with incoming Neolithic populations (Wolfe et al.
2007; Barnes et al. 2010). Those diseases known as 'zoonoses'
may have been derived through domestic livestock living in close and
regular proximity with humans in substantial populations (Weiss 2001;
Armelagos & Harper 2005; Wolfe et al. 2007). Such conditions arose
during the eighth or seventh millennium BC at settlements such as
Catalhoyuk in southern Turkey, which probably housed several thousand
inhabitants (Cessford 2005). Spreading Neolithic farming populations may
then have carried these diseases across Europe.
Mediterranean Europe may also have been affected by zoonoses spreading through hunter-gatherer populations in advance of the spread
of farming. In the Adriatic, the number of sites declined sharply in the
Late Mesolithic (Biagi & Spataro 2002), and along the northern shore
of the western Mediterranean there is usually a stratigraphic gap of
several centuries or more between Mesolithic and Neolithic (Perrin 2005;
Forenbaher & Miracle 2006; Guilaine & Manen 2007).
Following on from the Mesolithic--Neolithic transition in the Near
East or Anatolia, an Early Neolithic population would subsequently have
undergone expansion and, in association with increased population
density, seen the development of outbreaks of communicable diseases
(Diamond & Bellwood 2003). Some resistance would have been likely to
have evolved through increased allelic variation of the major
histocompatibility complex in members of this population in response to
the pathogens concerned (Gluckman et al. 2009). If previously unexposed,
the European Mesolithic population would have no such protection. Though
the differences in susceptibility were probably not as great as for the
North American colonisation (Dobyns 1966; Diamond & Bellwood 2003;
Wolfe et al. 2007), such diseases might still have devastated Terminal
Mesolithic populations.
Though some diseases, such as tuberculosis, are observable from
archaeological skeletal remains (Roberts & Buikstra 2003), most
zoonoses are not so detectable, even by ancient DNA analysis (Barnes
& Thomas 2006). There is, nevertheless, evidence of rapid selection
for genetic resistance to one or more of these diseases during the last
7000 years or so (Wolfe et al. 2007).
We suggest that a prime genetic candidate for this resistance is
CCR5-[DELTA]32, a mutant allele of the CCR5 gene. Normally, this gene
encodes the lymphocyte transmembrane coreceptor to which HIV can bind
(Dean et al. 1996; Liu et al. 1996), enabling the virus to infect CD4
lymphocytes. In people homozygous for the CCR5-[DELTA]32 allele,
however, the truncated CCR5 does not reach the cell surface, thus
preventing access to HIV.
The CCR5-[DELTA]32 allele is found in 10-15% of people of Northern
European descent and is rare or absent in those of Asian or African
descent (O'Brien et al. 2008). Within Europe there is a north to
south gradient in its distribution with highest frequencies being found
in Finnish and adjacent Russian populations, suggesting that the
original mutation producing this allele took place in north-east Europe
(Libert et al. 1998).
Mesolithic DNA from southern Sweden dates the allele to around 7000
years ago, suggesting it originated in Mesolithic populations, and yet
achieved a frequency of 17% in Swedish Neolithic populations (Liden et
al. 2006). To increase in frequency so rapidly implies considerable
selection pressure. The Early Neolithic was a time of unique new
selection pressure; the gene-culture co-evolution of Neolithic
subsistence farmers with persistent lactase production enabling lactose
tolerance occurred through strong selection for the T-13910 allele that
exists among most modern Europeans, but which was negligible amongst the
earliest Neolithic Europeans (Burger et al. 2007; Itan et al. 2010).
Among the diseases CCR5-[DELTA]32 allele may originally have
conferred resistance against, HIV-1 is an unlikely candidate because it
is thought to have originated in early twentieth-century Central Africa
(Korber et al. 2000; Vidal et al. 2000). However, CCR5-[DELTA]32 may
also protect against pox viruses that, like HIV, gain entry to
leucocytes by using chemokine receptors (Lalani et al. 1999). Galvani
and Slatkin (2003) suggested that children, being immunologically naive,
were more likely to be killed by smallpox, which selected against those
without the protective CCR5-[DELTA]32 allele, thus increasing its
frequency in populations.
If diseases such as smallpox had been brought to Europe via
Neolithic spread, it would be ironic if LBK populations gained
CCR5-[DELTA]32 frequency through intermarriage with certain north
European Mesolithic groups, who were already carriers of the
CCR5-[DELTA]32 allele (Liden et al. 2006). This could explain the
relative survival of some Mesolithic groups while others, lacking both
CCR5-[DELTA]32 and the more general resistance of Neolithic groups,
perished.
References
ARMELAGOS, G.J. & K.N. HARPER. 2005. Genomics at the origins of
agriculture. Evolutionary Anthropology 14: 68-77, 109-121.
BARNES, I. & M.G. THOMAS. 2006. Evaluating bacterial pathogen
DNA preservation in museum osteological collections. Proceedings of the
Royal Society B 273: 645-53.
BARNES, I., A. DUDA, O.G. PYBUS & M.G. THOMAS. 2010. Ancient
urbanisation predicts resistance to tuberculosis. Evolution 65(3):
842-8.
BIAGI, P. & M. SPATARO. 2002. The Mesolithic/Neolithic
transition in north eastern Italy and the Adriatic Basin. Saguntum
Extra-5: 167-78.
BURGER, J., M. KIRCHNER, B. BRAMANTI, W. HAAK & M.G. THOMAS.
2007. Absence of the lactase-persistence-associated allele in early
Neolithic Europeans. Proceedings of the National Academy of Sciences USA
104: 3736-41.
CESSFORD, C. 2005. Estimating the Neolithic population of
Catalhoyuk, in I. Hodder (ed.) Inhabiting Catalhoyuk: report from the
1995-99 seasons. Cambridge: McDonald Institute for Archaeological
Research & British Institute for Archaeology at Ankara.
DEAN, M., M. CARRINGTON, C. WINKLER, G.A. HUTTLEY, M.W. SMITH, R.
ALLIKMETS, J.J. GOEDERT, S.P. BUCHBINDER, E. VITTINGHOFF, E. GOMPERTS,
S. DONFIELD, D. VLAHOV, R. KASLOW, A. SAAH, C. RINALDO, R. DETELS &
S.J. O'BRIEN. 1996. Genetic restriction of HIV-1 infection and
progression to MDS by a deletion allele of the CKR5 structural gene.
Science 273: 1856-62.
DIAMOND, J. & P. BELLWOOD. 2003. Farmers and their languages:
the first expansions. Science 300: 597-603.
DOBYNS, H.F. 1966. An appraisal of techniques with a new
hemispheric estimate. Current Anthropology 7: 395-416.
DOLUKHANOV, P., A. SHUKUROV, D. GRONENBORN, D. SOKOLOFF, V.
TIMOFEEV & G. ZAITSEVA. 2005. The chronology of Neolithic dispersal
in Central and Eastern Europe. Journal of Archaeological Science 32:
1441-58.
FORENBAHER, S. & P.T. MIRACLE. 2006. The spread of farming in
the eastern Adriatic. Documenta Praehistorica 33: 89-100.
GALVANI, A.P. & M. SLATKIN. 2003. Evaluating plague and
smallpox as historical selective pressures for the CCR5-[DELTA]32
HIV-resistance allele. Proceedings of the National Academy of Sciences
USA 100:15276-9.
GLUCKMAN, P., A. BEEDLE & M. HANSON. 2009. Principles of
evolutionary medicine. Oxford: Oxford University Press.
GRONENBORN, D. 1999. A variation on a basic theme: the transition
to farming in southern Central Europe. Journal of World Prehistory 2:
23-210.
-- 2009. Climate fluctuations and trajectories to complexity in the
Neolithic: towards a theory. Documenta Praehistorica 36: 97-110.
GUILAINE, J. & C. MANEN. 2007. From Mesolithic to Early
Neolithic in the western Mediterranean, in A. Whittle & V. Cummings
(ed.) Going over: the Mesolithic--Neolithic transition in north-west
Europe (Proceedings of the British Academy): 21-51. London: British
Academy.
ITAN, Y., B.L. JONES, C.J.E. INGRAM, D.M. SWALLOW & M.G.
THOMAS. 2010. A worldwide correlation of lactase persistence phenotype
and genotypes. BMC Evolutionary Biology 10: 36.
KORBER, B., M. MULDOON, J. THEILER, F. GAO, R. GUPTA, A. LAPEDES,
B.H. HAHN, S. WOLINSKY & T. BHATTACHARYA. 2000. Timing the ancestor
of the HIV-1 pandemic strains. Science 288: 1789-96.
LALANI, A.S., J. MASTERS, W. ZENG, J. BARRETT, R. PANNU & H.
EVERETT. 1999. Use of chemokine receptors by poxviruses. Science 286:
1968-71.
LIBERT, F., P. COCHAUX, G. BECKMAN, M. SAMSON, M. ASKENOVA, A. CAO,
A. CZEIZEL, M. CLAUSTRE, C. DE LA RUA, M. FERRARI, C. FERREC, G. GLOVER,
B. GRINDE, S. GURAN, V. KUCINSKAS, J. LAVINHA, B. MERCIER, G. OGUR, L.
PELTONEN, C. ROSATELLI, M. SCHWARTZ, V. SPITSYN, L. TIMAR, L. BECKMAN,
M. PARMENTIER & G. VASSART. 1998. The [DELTA]CCR5 mutation
conferring protection against HIV-1 in Caucasian populations has a
single and recent origin in Northeastern Europe. Human Molecular
Genetics 7: 399-406.
LIDEN, K., A. LINDERHOLM & A. GOTHERSTROM. 2006. Pushing it
back. Dating the CCR5-[DELTA]32-bp deletion to the Mesolithic in Sweden
and irs implications for the Meso/Neo transition. Documenta
Praehistorica 33: 29-37.
LIU, R., W.A. PAXTON, S. CHOE, D. CERADINI, S.R. MARTIN, R. HORUK,
M.E. MACDONALD, H. STUHLMANN, R.A. KOUP & N.R. LANDAU. 1996.
Homozygous defect in HIV-1 coreceptor accounts for resistance of some
multiply-exposed individuals to HIV-1 infection. Cell 86: 367-77.
LUNING, J., U. KLOOS & S. ALBERT. 1989. Westliche Nachbarn der
bandkeramischen Kultur: La Hoguette und Limburg. Germania 67: 355-93.
O'BRIEN, T.R., T.M. WELZEL & R.A. KASLOW. 2008. Human
Immunodeficiency Virus Type 1 (HIV-1) and Acquired Immunodeficiency
Syndrome (AIDS), in R.A. Kaslow, J.M. McNicholl & A.V.S. Hill (ed.)
Genetic susceptibility to infectious diseases: 282-302. Oxford: Oxford
University Press.
PERRIN, T. 2005. Nouvelles reflexions sur la transition
Mesolithique recent--Neolithique ancien a l'abri Gaban (Trento,
Italie). Preistoria Alpina 41: 89-146.
ROBERTS, C.A. & J.E. BUIKSTRA. 2003. The bioarchaeology of
tuberculosis. Gainesville (FL): University Press of Florida.
VIDAL, N., M. PEETERS, C. MULANGA-KABEYA, N. NZILAMBI, D.
ROBERTSON, W. ILUNGA, H. SEMA, K. TSHIMANGA, B. BONGO & E.
DELAPORTE. 2000. Unprecedented degree of Human Immunodeficiency Virus
Type1 (HIV-1) Group M genetic diversity in the Democratic Republic of
Congo suggests that the HIV-1 pandemic originated in Central Africa.
Journal of Virology 74: 10498-507.
WEISS, R.A. 2001. Animal origins of human infectious diseases
Philosophical Transactions of the Royal Society B 356: 957-77.
WOLFE, N.D., C.P. DUNAVAN & J. DIAMOND. 2007. Origins of major
human infectious diseases. Nature 447: 279-83.
Ian Holtby (1), Chris Scarre (1), R. Alexander Bentley (2) &
Peter Rowley-Conwy (1)
(1) Departments of Anthropology and Archaeology, Durham University,
Dawson Bldg, South Road, Durham DH1 3LE, UK (Email:
ian.holtby@durham.ac.uk; chris.scarre@durham.ac.uk;
p.a.rowley-conwy@durham.ac.uk)
(2) Department of Archaeology and Anthropology, University of
Bristol, 43 WoodlandRoad, Bristol BS8 1UU, UK (Email:
r.a.bentley@bristol.ac.uk)