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  • 标题:Distance-based Species Tree Estimation: Information-Theoretic Trade-off between Number of Loci and Sequence Length under the Coalescent
  • 本地全文:下载
  • 作者:Elchanan Mossel ; Sebastien Roch
  • 期刊名称:LIPIcs : Leibniz International Proceedings in Informatics
  • 电子版ISSN:1868-8969
  • 出版年度:2015
  • 卷号:40
  • 页码:931-942
  • DOI:10.4230/LIPIcs.APPROX-RANDOM.2015.931
  • 出版社:Schloss Dagstuhl -- Leibniz-Zentrum fuer Informatik
  • 摘要:We consider the reconstruction of a phylogeny from multiple genes under the multispecies coalescent. We establish a connection with the sparse signal detection problem, where one seeks to distinguish between a distribution and a mixture of the distribution and a sparse signal. Using this connection, we derive an information-theoretic trade-off between the number of genes needed for an accurate reconstruction and the sequence length of the genes.
  • 关键词:phylogenetic reconstruction; multispecies coalescent; sequence length requirement.
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