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  • 标题:Quantitative proteomics approach for identifying protein–drug interactions in complex mixtures using protein stability measurements
  • 本地全文:下载
  • 作者:Graham M. West ; Chandra L. Tucker ; Tao Xu
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2010
  • 卷号:107
  • 期号:20
  • 页码:9078-9082
  • DOI:10.1073/pnas.1000148107
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:Knowledge about the protein targets of therapeutic agents is critical for understanding drug mode of action. Described here is a mass spectrometry-based proteomics method for identifying the protein target(s) of drug molecules that is potentially applicable to any drug compound. The method, which involves making thermodynamic measurements of protein-folding reactions in complex biological mixtures to detect protein-drug interactions, is demonstrated in an experiment to identify yeast protein targets of the immunosuppressive drug, cyclosporin A (CsA). Two of the ten protein targets identified in this proof of principle work were cyclophilin A and UDP-glucose-4-epimerase, both of which are known to interact with CsA, the former through a direct binding event (Kd [~] 70 nM) and the latter through an indirect binding event. These two previously known protein targets validate the methodology and its ability to detect both the on- and off-target effects of protein-drug interactions. The other eight protein targets discovered here, which include several proteins involved in glucose metabolism, create a new framework in which to investigate the molecular basis of CsA side effects in humans.
  • 关键词:cyclosporine ; liquid chromatography-mass spectrometry ; ligand binding ; protein folding ; thermodynamics
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