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  • 标题:Three-helix-bundle protein in a Ramachandran model
  • 本地全文:下载
  • 作者:Anders Irbäck ; Fredrik Sjunnesson ; Stefan Wallin
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2000
  • 卷号:97
  • 期号:25
  • 页码:13614-13618
  • DOI:10.1073/pnas.240245297
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:We study the thermodynamic behavior of a model protein with 54 amino acids that forms a three-helix bundle in its native state. The model contains three types of amino acids and five to six atoms per amino acid and has the Ramachandran torsional angles {varphi}i, {psi}i as its degrees of freedom. The force field is based on hydrogen bonds and effective hydrophobicity forces. For a suitable choice of the relative strength of these interactions, we find that the three-helix-bundle protein undergoes an abrupt folding transition from an expanded state to the native state. Also shown is that the corresponding one- and two-helix segments are less stable than the three-helix sequence.
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