期刊名称:Proceedings of the National Academy of Sciences
印刷版ISSN:0027-8424
电子版ISSN:1091-6490
出版年度:1999
卷号:96
期号:22
页码:12465-12470
DOI:10.1073/pnas.96.22.12465
语种:English
出版社:The National Academy of Sciences of the United States of America
摘要:Double-stranded RNA deaminase I (ADAR1) contains the Z-DNA binding domain Z. Here we report the solution structure of free Z and map the interaction surface with Z-DNA, confirming roles previously assigned to residues by mutagenesis. Comparison with the crystal structure of the (Z)2/Z-DNA complex shows that most Z-DNA contacting residues in free Z are prepositioned to bind Z-DNA, thus minimizing the entropic cost of binding. Comparison with homologous (+{beta})helix-turn-helix/B-DNA complexes suggests that binding of Z to B-DNA is disfavored by steric hindrance, but does not eliminate the possibility that related domains may bind to both B- and Z-DNA.