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  • 标题:A small single-domain protein folds through the same pathway on and off the ribosome
  • 作者:Emily J. Guinn ; Pengfei Tian ; Mia Shin
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2018
  • 卷号:115
  • 期号:48
  • 页码:12206-12211
  • DOI:10.1073/pnas.1810517115
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:In vivo, proteins fold and function in a complex environment subject to many stresses that can modulate a protein’s energy landscape. One aspect of the environment pertinent to protein folding is the ribosome, since proteins have the opportunity to fold while still bound to the ribosome during translation. We use a combination of force and chemical denaturant (chemomechanical unfolding), as well as point mutations, to characterize the folding mechanism of the src SH3 domain both as a stalled ribosome nascent chain and free in solution. Our results indicate that src SH3 folds through the same pathway on and off the ribosome. Molecular simulations also indicate that the ribosome does not affect the folding pathway for this small protein. Taken together, we conclude that the ribosome does not alter the folding mechanism of this small protein. These results, if general, suggest the ribosome may exert a bigger influence on the folding of multidomain proteins or protein domains that can partially fold before the entire domain sequence is outside the ribosome exit tunnel.
  • 关键词:protein folding ; ribosome ; cotranslational folding ; single-molecule force spectroscopy ; optical tweezers
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