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  • 标题:Output-Oblivious Stochastic Chemical Reaction Networks
  • 本地全文:下载
  • 作者:Ben Chugg ; Hooman Hashemi ; Anne Condon
  • 期刊名称:LIPIcs : Leibniz International Proceedings in Informatics
  • 电子版ISSN:1868-8969
  • 出版年度:2018
  • 卷号:125
  • 页码:1-16
  • DOI:10.4230/LIPIcs.OPODIS.2018.21
  • 出版社:Schloss Dagstuhl -- Leibniz-Zentrum fuer Informatik
  • 摘要:We classify the functions f:N^2 -> N which are stably computable by output-oblivious Stochastic Chemical Reaction Networks (CRNs), i.e., systems of reactions in which output species are never reactants. While it is known that precisely the semilinear functions are stably computable by CRNs, such CRNs sometimes rely on initially producing too many output species, and then consuming the excess in order to reach a correct stable state. These CRNs may be difficult to integrate into larger systems: if the output of a CRN C becomes the input to a downstream CRN C', then C' could inadvertently consume too many outputs before C stabilizes. If, on the other hand, C is output-oblivious then C' may consume C's output as soon as it is available. In this work we prove that a semilinear function f:N^2 -> N is stably computable by an output-oblivious CRN with a leader if and only if it is both increasing and either grid-affine (intuitively, its domains are congruence classes), or the minimum of a finite set of fissure functions (intuitively, functions behaving like the min function).
  • 关键词:Chemical Reaction Networks; Stable Function Computation; Output-Oblivious; Output-Monotonic
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