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  • 标题:Assessing aneuploidy with repetitive element sequencing
  • 本地全文:下载
  • 作者:Christopher Douville ; Joshua D. Cohen ; Janine Ptak
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2020
  • 卷号:117
  • 期号:9
  • 页码:4858-4863
  • DOI:10.1073/pnas.1910041117
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:We report a sensitive PCR-based assay called Repetitive Element AneupLoidy Sequencing System (RealSeqS) that can detect aneuploidy in samples containing as little as 3 pg of DNA. Using a single primer pair, we amplified ∼350,000 amplicons distributed throughout the genome. Aneuploidy was detected in 49% of liquid biopsies from a total of 883 nonmetastatic, clinically detected cancers of the colorectum, esophagus, liver, lung, ovary, pancreas, breast, or stomach. Combining aneuploidy with somatic mutation detection and eight standard protein biomarkers yielded a median sensitivity of 80% in these eight cancer types, while only 1% of 812 healthy controls scored positive.
  • 关键词:liquid biopsy ; aneuploidy ; early cancer detection ; circulating tumor DNA
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