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  • 标题:Complete genome sequence and genomic characterization of Microcystis panniformis FACHB 1757 by third-generation sequencing
  • 本地全文:下载
  • 作者:Jun-Yi Zhang ; Rui Guan ; Hu-Jun Zhang
  • 期刊名称:Environmental Microbiome
  • 印刷版ISSN:2524-6372
  • 出版年度:2016
  • 卷号:11
  • 期号:1
  • 页码:1-13
  • DOI:10.1186/s40793-016-0130-5
  • 摘要:The cyanobacterial genus Microcystis is well known as the main group that forms harmful blooms in water. A strain of Microcystis, M. panniformis FACHB1757, was isolated from Meiliang Bay of Lake Taihu in August 2011. The whole genome was sequenced using PacBio RS II sequencer with 48-fold coverage. The complete genome sequence with no gaps contained a 5,686,839 bp chromosome and a 38,683 bp plasmid, which coded for 6,519 and 49 proteins, respectively. Comparison with strains of M. aeruginosa and some other water bloom-forming cyanobacterial species revealed large-scale structure rearrangement and length variation at the genome level along with 36 genomic islands annotated genome-wide, which demonstrates high plasticity of the M. panniformis FACHB1757 genome and reveals that Microcystis has a flexible genome evolution.
  • 关键词:Microcystis panniformis FACHB1757;Microcystis;Lake Taihu;Water bloom;Third-generation sequencing;Comparative genomics
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