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  • 标题:Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium
  • 本地全文:下载
  • 作者:Jimmy H. W. Saw ; Anton Yuryev ; Masaomi Kanbe
  • 期刊名称:Environmental Microbiome
  • 印刷版ISSN:2524-6372
  • 出版年度:2012
  • 卷号:6
  • 期号:1
  • 页码:84-93
  • DOI:10.4056/sigs.2445005
  • 摘要:Saprospira grandis is a coastal marine bacterium that can capture and prey upon other marine bacteria using a mechanism known as ‘ixotrophy’. Here, we present the complete genome sequence of Saprospira grandis str. Lewin isolated from La Jolla beach in San Diego, California. The complete genome sequence comprises a chromosome of 4.35 Mbp and a plasmid of 54.9 Kbp. Genome analysis revealed incomplete pathways for the biosynthesis of nine essential amino acids but presence of a large number of peptidases. The genome encodes multiple copies of sensor globin-coupled rsbR genes thought to be essential for stress response and the presence of such sensor globins in Bacteroidetes is unprecedented. A total of 429 spacer sequences within the three CRISPR repeat regions were identified in the genome and this number is the largest among all the Bacteroidetes sequenced to date.
  • 关键词:Saprospira grandis;predatory;RsbR;gliding motility;globin-coupled sensors;rhapidosomes
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