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  • 标题:Computational advances of tumor marker selection and sample classification in cancer proteomics
  • 本地全文:下载
  • 作者:Jing Tang ; Yunxia Wang ; Yongchao Luo
  • 期刊名称:Computational and Structural Biotechnology Journal
  • 印刷版ISSN:2001-0370
  • 出版年度:2020
  • 卷号:18
  • 页码:2012-2025
  • DOI:10.1016/j.csbj.2020.07.009
  • 出版社:Computational and Structural Biotechnology Journal
  • 摘要:Cancer proteomics has become a powerful technique for characterizing the protein markers driving transformation of malignancy, tracing proteome variation triggered by therapeutics, and discovering the novel targets and drugs for the treatment of oncologic diseases. To facilitate cancer diagnosis/prognosis and accelerate drug target discovery, a variety of methods for tumor marker identification and sample classification have been developed and successfully applied to cancer proteomic studies. This review article describes the most recent advances in those various approaches together with their current applications in cancer-related studies. Firstly, a number of popular feature selection methods are overviewed with objective evaluation on their advantages and disadvantages. Secondly, these methods are grouped into three major classes based on their underlying algorithms. Finally, a variety of sample separation algorithms are discussed. This review provides a comprehensive overview of the advances on tumor maker identification and patients/samples/tissues separations, which could be guidance to the researches in cancer proteomics.
  • 关键词:Cancer proteomics ; Tumor marker selection ; Sample classification ; Computational methods
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