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  • 标题:Activity, Binding, and Modeling Studies of a Reprogrammed Aryl Acid Adenylation Domain with an Enlarged Substrate Binding Pocket
  • 本地全文:下载
  • 作者:Fumihiro Ishikawa ; Hinano Kitayama ; Shinya Nakamura
  • 期刊名称:Chemical and Pharmaceutical Bulletin
  • 印刷版ISSN:0009-2363
  • 电子版ISSN:1347-5223
  • 出版年度:2021
  • 卷号:69
  • 期号:2
  • 页码:222-225
  • DOI:10.1248/cpb.c20-00704
  • 出版社:The Pharmaceutical Society of Japan
  • 摘要:The gatekeeping adenylation (A) domain of the non-ribosomal peptide synthetase (NRPS) selectively incorporates specific proteinogenic/non-proteinogenic amino acid into a growing peptide chain. The EntE of the enterobactin NRPS is a discrete aryl acid A-domain with 2,3-dihydroxybenzoic acid (DHB) substrate specificity. Reprogrammed EntE N235G variant possesses an enlarged substrate recognition site, and is capable of accepting non-native aryl acids. Biochemical characterization of this unique substrate recognition site should provide a better understanding of activi-site microenvironments. Here, we synthesized a non-hydrolysable adenylate analogue with 2-aminobenzoic acid (2-ABA), 3-aminobenzoic acid (3-ABA), and 4-aminobenzoic acid (4-ABA) and used them to calculate the apparent inhibition constants ( K i app. ). Dose–response experiments using 3-ABA-sulfamoyladenosine (AMS) provided K i app. values of 596 nM for wild-type EntE and 2.4 nM for the N235G variants. These results suggest that 3-amino group of benzoic acid plays an important role in substrate recognition by the N235G variant. These findings would help designing aryl acid substrates with substituents at the 2- and 3-positions.
  • 关键词:non-ribosomal peptide synthetase;adenylation domain;reprogramming;non-hydrolyzable acyl adenylate;aryl acid
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