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  • 标题:Machine learning predicts the functional composition of the protein corona and the cellular recognition of nanoparticles
  • 本地全文:下载
  • 作者:Zhan Ban ; Peng Yuan ; Fubo Yu
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2020
  • 卷号:117
  • 期号:19
  • 页码:10492-10499
  • DOI:10.1073/pnas.1919755117
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:Protein corona formation is critical for the design of ideal and safe nanoparticles (NPs) for nanomedicine, biosensing, organ targeting, and other applications, but methods to quantitatively predict the formation of the protein corona, especially for functional compositions, remain unavailable. The traditional linear regression model performs poorly for the protein corona, as measured by R 2 (less than 0.40). Here, the performance with R 2 over 0.75 in the prediction of the protein corona was achieved by integrating a machine learning model and meta-analysis. NPs without modification and surface modification were identified as the two most important factors determining protein corona formation. According to experimental verification, the functional protein compositions (e.g., immune proteins, complement proteins, and apolipoproteins) in complex coronas were precisely predicted with good R 2 (most over 0.80). Moreover, the method successfully predicted the cellular recognition (e.g., cellular uptake by macrophages and cytokine release) mediated by functional corona proteins. This workflow provides a method to accurately and quantitatively predict the functional composition of the protein corona that determines cellular recognition and nanotoxicity to guide the synthesis and applications of a wide range of NPs by overcoming limitations and uncertainty.
  • 关键词:machine learning ; nanotoxicity ; nano-bio interface ; cellular recognition ; protein corona
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