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  • 标题:Comparing Quantitative Trait Loci and Gene Expression Data
  • 本地全文:下载
  • 作者:Bing Han ; Naomi S. Altman ; Jessica A. Mong
  • 期刊名称:Advances in Bioinformatics
  • 印刷版ISSN:1687-8027
  • 电子版ISSN:1687-8035
  • 出版年度:2008
  • 卷号:2008
  • DOI:10.1155/2008/719818
  • 出版社:Hindawi Publishing Corporation
  • 摘要:We develop methods to compare the positions of quantitative trait loci (QTL) with a set of genes selected by other methods, such as microarray experiments, from a sequenced genome. We apply our methods to QTL for addictive behavior in mouse, and a set of genes upregulated in a region of the brain associated with addictive behavior, the nucleus accumbens (NA). The association between the QTL and NA genes is not significantly stronger than expected by chance. However, chromosomes 2 and 16 do show strong associations suggesting that genes on these chromosomes might be associated with addictive behavior. The statistical methodology developed for this study can be applied to similar studies to assess the mutual information in microarray and QTL analyses.
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