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文章基本信息

  • 标题:Detect Key Gene Information in Classification of Microarray Data
  • 本地全文:下载
  • 作者:Yihui Liu
  • 期刊名称:EURASIP Journal on Advances in Signal Processing
  • 印刷版ISSN:1687-6172
  • 电子版ISSN:1687-6180
  • 出版年度:2008
  • 卷号:2008
  • DOI:10.1155/2008/612397
  • 出版社:Hindawi Publishing Corporation
  • 摘要:

    We detect key information of high-dimensional microarray profiles based on wavelet analysis and genetic algorithm. Firstly, wavelet transform is employed to extract approximation coefficients at 2nd level, which remove noise and reduce dimensionality. Genetic algorithm (GA) is performed to select the optimized features. Experiments are performed on four datasets, and experimental results prove that approximation coefficients are efficient way to characterize the microarray data. Furthermore, in order to detect the key genes in the classification of cancer tissue, we reconstruct the approximation part of gene profiles based on orthogonal approximation coefficients. The significant genes are selected based on reconstructed approximation information using genetic algorithm. Experiments prove that good performance of classification is achieved based on the selected key genes.

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