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  • 标题:Simple tools for assembling and searching high-density picolitre pyrophosphate sequence data
  • 本地全文:下载
  • 作者:Nicolas J Parker ; Andrew G Parker
  • 期刊名称:Source Code for Biology and Medicine
  • 印刷版ISSN:1751-0473
  • 电子版ISSN:1751-0473
  • 出版年度:2008
  • 卷号:3
  • 期号:1
  • 页码:5
  • DOI:10.1186/1751-0473-3-5
  • 语种:English
  • 出版社:BioMed Central
  • 摘要:The advent of pyrophosphate sequencing makes large volumes of sequencing data available at a lower cost than previously possible. However, the short read lengths are difficult to assemble and the large dataset is difficult to handle. During the sequencing of a virus from the tsetse fly, Glossina pallidipes, we found the need for tools to search quickly a set of reads for near exact text matches. A set of tools is provided to search a large data set of pyrophosphate sequence reads under a
  • 关键词:Sanger Sequencing ; Preceding Base ; Exact Repeat ; Short Read Length ; Matching Fragment
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