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  • 标题:An initial strategy for the systematic identification of functional elements in the human genome by low-redundancy comparative sequencing
  • 本地全文:下载
  • 作者:Elliott H. Margulies ; Jade P. Vinson ; NISC Comparative Sequencing Program
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2005
  • 卷号:102
  • 期号:13
  • 页码:4795-4800
  • DOI:10.1073/pnas.0409882102
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:With the recent completion of a high-quality sequence of the human genome, the challenge is now to understand the functional elements that it encodes. Comparative genomic analysis offers a powerful approach for finding such elements by identifying sequences that have been highly conserved during evolution. Here, we propose an initial strategy for detecting such regions by generating low-redundancy sequence from a collection of 16 eutherian mammals, beyond the 7 for which genome sequence data are already available. We show that such sequence can be accurately aligned to the human genome and used to identify most of the highly conserved regions. Although not a long-term substitute for generating high-quality genomic sequences from many mammalian species, this strategy represents a practical initial approach for rapidly annotating the most evolutionarily conserved sequences in the human genome, providing a key resource for the systematic study of human genome function.
  • 关键词:comparative genomics ; genome sequencing ; genome analysis ; phylogenetics ; mammalian evolution
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