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  • 标题:Sequence dependence of hydrogen exchange kinetics in DNA duplexes at the individual base pair level in solution
  • 本地全文:下载
  • 作者:D J Patel ; S Ikuta ; S Kozlowski
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:1983
  • 卷号:80
  • 期号:8
  • 页码:2184-2188
  • DOI:10.1073/pnas.80.8.2184
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:The kinetics for hydrogen exchange at individual base pairs in self-complementary deoxydodecanucleotide duplexes have been estimated from NMR saturation recovery measurements on the resolved imino protons as a function of temperature. The imino protons of dA . dT base pairs in the center of the fully alternating d(C-G-C-G-T-A-T-A-C-G-C-G) duplex exchange a factor of 2- to 3-fold faster than the corresponding protons at the same positions in the partially alternating d(C-G-C-G-A-A-T-T-C-G-C-G) duplex. These exchange parameters are a direct measure of the rate constants for transient opening of individual dA . dT base pairs in the dodecanucleotide duplexes and demonstrate faster opening kinetics for the "TATA" box region compared to the related "AATT" segment.
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