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  • 标题:An Improved Correlation Measure-based SOM Clustering Algorithm for Gene Selection
  • 本地全文:下载
  • 作者:Xu, Jiucheng ; Xu, Tianhe ; Sun, Lin
  • 期刊名称:Journal of Software
  • 印刷版ISSN:1796-217X
  • 出版年度:2013
  • 卷号:8
  • 期号:12
  • 页码:3082-3087
  • DOI:10.4304/jsw.8.12.3082-3087
  • 语种:English
  • 出版社:Academy Publisher
  • 摘要:Among the large amount of genes presented in microarray gene expression data, only a small fraction of them is effective for performing a certain diagnostic test. For this reason, reducing the dimensionality of gene expression data is imperative. Self-organizing map (SOM) is a type of mathematical cluster analysis which particularly well suited for recognizing and classifying features in complex, multidimensional data. This paper proposes an improved Self-organizing map clustering algorithm which based on neighborhood mutual information correlation measure. To evaluate the performance of the proposed approach, we apply it to six well-known gene expression datasets and compare our results with those obtained by other methods. Finally, the experimental results show that the proposed approach to gene selection is indeed efficient.
  • 关键词:self-organizing map; neighborhood mutual information;correlation measure;clustering algorithm
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